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RNA22
microRNA target detection & precursor prediction

Reference: A pattern-based method for the identification of microRNA-target sites and their corresponding RNA/RNA complexes T. Huynh, K. Miranda, Y. Tay, Y.-S. Ang, W.-L. Tam, A. M. Thomson, B. Lim, I. Rigoutsos Cell, Vol 126, 1203-1217, 22 September 2006.


May 20, 2008:  an expanded interface to rna22 has been released.
       (i) predict microRNA targets
       (ii) predict novel microRNA precursors and their corresponding matures  (new!)
       (iv) use our revised batch utility to predict targets
       (iii) use a batch utility to predict precursors and their corresponding matures  (new!)
Other announcements...


Access our Web-based Interfaces
  • predict microRNA targets
  • predict novel precursors and their mature microRNA(s)   (new!)

    • Access our Batch-submission Utilities
  • predict novel precursors/matures (many candidate sequences) without supervision   (new!)
  • predict targets (many microRNAs/many candidate sequences) without supervision

    • Access our Content
  • download pre-compiled rna22 predictions for several model organisms


    • Do You Have Comments? Suggestions? Questions? Email us!
    For related work visit the pyknon page here
    Access the rest of the Web Tools by IBM's Bioinformatics & Pattern Discovery Group