|
Reference: A pattern-based method for the identification of microRNA-target sites
and their corresponding RNA/RNA complexes T. Huynh, K. Miranda, Y. Tay, Y.-S. Ang,
W.-L. Tam, A. M. Thomson, B. Lim, I. Rigoutsos Cell, Vol 126, 1203-1217, 22 September 2006.
May 20, 2008 (!!new!!) We have now released a new web interface and a batch submission utility for predicting novel precursors and their mature microRNAs . You can access them by visiting this page . March 21, 2007 In response to requests by numerous users, we now make available a utility that will allow you to predict targets in batch mode (many microRNAs vs many target sequences). You can access it from this page here . November 11, 2006 You can now download rna22 predictions (content) as compressed text files. You can access them from this page here . These predictions correspond to stringent threshold settings. If you wish to generate target predictions for more 'lenient' threshold choices, please use the interactive server or our batch utility. October 27, 2006 The output page now includes a frame with the results reported using a recently-devised heuristic ordering / light-green= higher-quality candidates light-red= lower-quality candidates October 10, 2006 We now report the target islands in spreadsheet-ready format (see link at the top of results page). Target islands are reported even when no heteroduplexes are found for the tested microRNA/mRNA pair) Do You Have Comments? Suggestions? Questions? Email us! For related work visit the pyknon page here Access the rest of the Web Tools by IBM's Bioinformatics & Pattern Discovery Group |